state (Emission order) Genome % CpG.hg19.bed.gz Exons.Gencodev10.hg19.bed.gz Genes.Gencodev10.hg19.bed.gz Introns.Gencodev10.hg19.bed.gz TES.Gencodev10.hg19.bed.gz TES_2kbp.Gencodev10.hg19.bed.gz TSS.Gencodev10.hg19.bed.gz TSS_2kbp.Gencodev10.hg19.bed.gz ZNF_genes.bed.gz 1 0.04751 4.51643 7.85799 1.84235 1.38372 11.49098 4.75419 6.42525 6.92389 3.65804 2 0.80398 54.78398 7.29379 1.52273 1.08143 3.43665 2.67101 41.76305 9.00760 3.96340 3 0.32547 79.65296 7.55943 1.39002 0.91806 3.94994 2.65932 21.86302 7.96999 1.22792 4 0.12826 18.72531 3.72680 1.30617 1.12283 2.67976 2.23898 5.76585 6.56616 0.86846 5 0.38152 1.67833 2.20197 1.39989 1.34127 1.72466 1.60026 4.13352 4.77211 1.85514 6 0.02249 0.64536 5.87094 1.84983 1.54481 6.12177 3.72787 3.60373 5.24363 4.21364 7 0.14474 0.35783 4.81908 1.89347 1.67283 4.40179 3.30407 2.10448 2.49340 3.21415 8 6.09741 0.44111 1.81917 1.82979 1.83479 1.60141 1.84027 0.92411 1.61104 2.08057 9 3.11567 0.81065 3.56311 1.93930 1.81839 3.45609 3.30945 1.39447 2.09555 2.80727 10 2.66395 0.71096 5.92023 1.97940 1.68008 6.59977 4.69380 2.30277 2.93782 2.76618 11 0.13696 0.24728 5.97157 1.89504 1.58608 5.42798 3.97539 1.57300 2.00431 48.59271 12 0.24301 0.50157 1.85992 1.80567 1.80574 2.04736 1.93322 0.85601 1.38425 19.01506 13 2.92883 0.32508 0.50759 0.61912 0.62883 0.57802 0.67117 0.40401 0.67382 1.68316 14 1.97405 0.38685 0.87733 0.53750 0.51256 0.93791 0.94287 0.65826 0.91914 4.79998 15 0.88930 0.20660 0.33393 0.80494 0.84279 0.37902 0.48172 0.27568 0.47660 0.52681 16 7.44812 0.18737 0.38482 0.62684 0.64572 0.46747 0.52677 0.33614 0.50617 0.26297 17 0.11148 2.54320 2.11602 0.52225 0.40113 1.72900 1.33996 2.02352 1.59660 12.36498 18 0.02505 0.05283 0.92502 0.92576 0.92578 0.64425 0.69968 0.80870 1.05716 1.72484 19 2.75984 0.10419 0.71182 1.16492 1.20230 0.70080 0.74805 0.97960 1.02220 0.57987 20 0.77596 0.17641 1.47545 1.84267 1.87529 1.14409 1.30184 1.26641 1.66565 2.08430 21 47.66918 0.16002 0.60926 1.02296 1.05662 0.68048 0.76216 0.46176 0.73967 0.55546 22 0.22737 4.18351 2.12772 1.15407 1.08182 1.77056 1.72091 2.15944 3.25932 0.55365 23 2.19451 0.55885 1.01439 0.89573 0.88826 1.02281 1.13246 0.70969 1.35089 0.47114 24 0.99164 3.18474 1.92127 1.04630 0.98089 1.68518 1.75909 1.35466 3.21460 0.75741 25 17.89370 0.13828 0.36392 0.50485 0.50626 0.39813 0.44027 0.29036 0.41644 0.27510 Base 100 0.68328 3.50523 49.34249 45.71419 0.00340 10.22906 0.00478 9.57817 0.68770