state (Emission order) Genome % CpG.hg19.bed.gz Exons.Gencodev10.hg19.bed.gz Genes.Gencodev10.hg19.bed.gz Introns.Gencodev10.hg19.bed.gz TES.Gencodev10.hg19.bed.gz TES_2kbp.Gencodev10.hg19.bed.gz TSS.Gencodev10.hg19.bed.gz TSS_2kbp.Gencodev10.hg19.bed.gz ZNF_genes.bed.gz 1 0.01106 18.82357 9.86318 1.94541 1.34130 10.81632 5.57941 8.85400 7.57042 5.35102 2 0.37186 77.49639 9.38993 1.58536 0.98742 3.27337 2.60204 71.91160 9.71123 4.76070 3 0.01416 78.28790 7.54985 1.32441 0.84754 3.82162 2.31495 39.67875 8.13189 0.97947 4 0.09527 94.43779 8.58734 1.43295 0.88566 4.15599 2.86522 22.57930 8.31279 0.65783 5 0.81453 23.41254 4.45023 1.50673 1.28338 2.80114 2.31935 12.55527 7.45190 2.57842 6 0.10522 3.93071 7.19930 1.92093 1.51918 9.06855 4.55486 5.01286 6.33716 1.75093 7 0.49736 1.16729 4.38675 1.93199 1.74753 4.82799 3.22357 2.11839 2.71116 1.37010 8 6.41710 0.25602 1.41464 1.79992 1.83358 1.30694 1.53869 0.75567 1.35415 1.75001 9 4.32208 0.39325 2.84249 1.93317 1.86736 2.72799 2.81501 1.17353 1.82026 1.80688 10 3.03779 1.26418 5.60442 1.96706 1.69114 6.21111 4.45033 2.26461 2.80799 2.19391 11 0.31132 1.36080 3.54785 1.90705 1.78548 3.04683 2.55225 1.05868 1.40916 47.87545 12 0.44179 0.51086 0.93011 1.82622 1.89948 0.85966 1.10928 0.46932 0.90391 19.56889 13 1.19341 0.52839 0.53553 0.62748 0.63606 0.58238 0.64092 0.40577 0.67227 4.51684 14 0.38808 1.37316 1.41832 0.64743 0.58979 1.14256 1.04867 0.66306 0.92609 11.85312 15 0.75102 1.69205 0.74068 0.84937 0.85931 0.75855 0.77993 0.67986 0.86201 0.57929 16 8.92745 0.10886 0.34238 0.70267 0.73199 0.43021 0.48970 0.29769 0.46633 0.31441 17 0.04699 12.10119 2.61660 0.58043 0.42533 2.16184 1.48394 4.67074 2.91251 14.74909 18 0.03360 7.32660 1.48336 0.99488 0.95921 1.44138 1.27669 1.84952 1.96493 3.27512 19 1.76082 0.87527 1.10266 0.99364 0.98740 1.08385 1.11433 1.45715 1.62654 0.53483 20 1.43755 0.61115 1.40712 1.64188 1.66378 1.28398 1.41984 1.36574 2.13586 1.24217 21 26.45162 0.19730 0.72836 1.00436 1.02684 0.81090 0.91130 0.55355 0.91461 0.50724 22 0.15023 49.73644 5.46247 1.29786 0.98016 3.65926 2.65189 11.04094 6.01656 0.42559 23 7.94511 0.52894 0.97998 0.99065 0.99250 0.96321 1.04052 0.70912 1.08652 0.44001 24 0.75862 8.68558 2.51159 1.15829 1.05677 1.84108 1.86780 2.98775 3.77041 0.47619 25 33.71596 0.08450 0.30515 0.65158 0.67419 0.34703 0.39791 0.24857 0.37633 0.34918 Base 100 0.68328 3.50523 49.34249 45.71419 0.00340 10.22906 0.00478 9.57817 0.68770