state (Emission order) Genome % CpG.hg19.bed.gz Exons.Gencodev10.hg19.bed.gz Genes.Gencodev10.hg19.bed.gz Introns.Gencodev10.hg19.bed.gz TES.Gencodev10.hg19.bed.gz TES_2kbp.Gencodev10.hg19.bed.gz TSS.Gencodev10.hg19.bed.gz TSS_2kbp.Gencodev10.hg19.bed.gz ZNF_genes.bed.gz 1 0.01005 16.77117 12.08126 1.92093 1.14463 11.81387 6.35045 7.73113 6.61871 2.71186 2 0.75028 63.32641 7.82847 1.53013 1.04824 3.22322 2.51808 47.00675 8.89937 3.47449 3 0.05058 79.66157 7.38795 1.29029 0.82389 4.44892 2.75809 22.55270 7.51582 0.71424 4 0.08640 89.76986 7.71325 1.40106 0.91847 4.38454 3.02275 16.98532 7.71932 0.73924 5 0.68021 15.11788 3.88925 1.57120 1.39610 2.78614 2.18558 7.48049 6.87892 2.77025 6 0.02970 5.38910 10.21690 1.94767 1.31621 12.24438 5.41028 5.70788 6.72818 3.25809 7 0.18328 1.54376 6.29425 1.94641 1.61648 6.62063 3.92282 2.77476 3.36235 2.30517 8 8.22579 0.28385 1.68470 1.85249 1.86961 1.53322 1.75664 0.82392 1.44776 1.93506 9 4.32782 0.65314 3.74105 1.94008 1.80543 3.75573 3.45192 1.46318 2.13625 2.56673 10 1.44673 2.06047 7.33242 1.97334 1.56485 7.96147 5.06812 2.77157 3.21298 3.87948 11 0.21967 1.01925 4.13382 1.87615 1.70735 3.14236 2.73920 0.94389 1.34923 50.67154 12 0.54882 0.39252 0.84128 1.83548 1.91562 0.85291 1.02705 0.43071 0.83191 17.24281 13 1.44784 0.34129 0.37663 0.68327 0.70841 0.47676 0.51488 0.31394 0.53034 2.47415 14 0.48425 1.21471 0.81738 0.62494 0.61169 0.90781 0.81788 0.59971 0.77351 6.71066 15 1.08678 0.48716 0.40005 0.86138 0.89820 0.46566 0.56772 0.33123 0.56277 0.46559 16 9.52528 0.12001 0.36598 0.69871 0.72531 0.46391 0.52852 0.32708 0.50747 0.28133 17 0.01255 29.19313 6.13612 0.81890 0.41247 5.82712 3.00533 10.55072 5.19233 7.49261 18 0.00692 6.74298 2.07120 1.25455 1.19481 3.01888 1.53090 3.22107 2.30011 5.83820 19 1.62522 0.44934 0.89797 1.15699 1.17909 0.78869 0.86702 1.23463 1.44160 0.55251 20 0.99230 0.57270 1.68867 1.86639 1.88444 1.46206 1.51067 1.51302 2.23774 1.75346 21 33.16579 0.19140 0.66532 1.04256 1.07301 0.74831 0.83624 0.51097 0.86104 0.50111 22 0.07832 32.77501 3.98498 1.20873 0.99784 3.60047 2.46685 5.38084 4.64774 0.51727 23 5.44832 0.36902 0.97049 0.88667 0.88178 0.99735 1.09639 0.74339 1.12902 0.36287 24 0.65734 4.89708 2.03462 1.01440 0.93825 1.77809 1.80670 1.73227 2.77876 0.52590 25 28.90975 0.09042 0.33707 0.56900 0.58182 0.38948 0.43429 0.28627 0.41603 0.34096 Base 100 0.68328 3.50523 49.34249 45.71419 0.00340 10.22906 0.00478 9.57817 0.68770