state (Emission order) Genome % CpG.hg19.bed.gz Exons.Gencodev10.hg19.bed.gz Genes.Gencodev10.hg19.bed.gz Introns.Gencodev10.hg19.bed.gz TES.Gencodev10.hg19.bed.gz TES_2kbp.Gencodev10.hg19.bed.gz TSS.Gencodev10.hg19.bed.gz TSS_2kbp.Gencodev10.hg19.bed.gz ZNF_genes.bed.gz 1 0.04836 18.21558 9.36957 1.93307 1.36571 11.17206 5.31156 9.69266 7.62151 2.08511 2 0.66879 50.05228 6.89651 1.52054 1.10965 3.17161 2.56288 44.12868 8.96754 3.80507 3 0.11302 101.43224 10.22995 1.58413 0.92154 3.46955 2.53437 46.13810 9.20019 2.03085 4 0.15508 93.88279 8.36564 1.41778 0.88627 4.28575 2.80579 20.21607 7.76917 0.77622 5 0.59883 14.11407 3.61882 1.46073 1.29771 2.68592 2.16801 8.06396 6.49567 2.34832 6 0.10475 5.50503 6.68893 1.94664 1.58602 8.53834 4.17246 5.21595 5.89420 2.44834 7 0.61916 1.22156 4.28896 1.94931 1.77364 4.63731 3.12833 2.22960 2.70421 1.48194 8 6.84363 0.18138 1.38897 1.79981 1.83552 1.22562 1.47675 0.70887 1.31303 1.70869 9 4.23934 0.34053 2.77161 1.93177 1.87137 2.63364 2.72334 1.11057 1.76084 2.36308 10 3.44799 1.16228 5.28432 1.97165 1.72080 5.81475 4.28259 2.11801 2.72937 2.95107 11 0.14363 1.56062 4.94987 1.87347 1.64174 4.15800 3.34667 1.19905 1.62412 68.10456 12 0.19882 0.61146 1.48839 1.67546 1.69400 1.06496 1.36970 0.45519 0.99256 36.22159 13 6.66038 0.12270 0.29769 0.61687 0.64289 0.39317 0.46085 0.27003 0.46132 1.09930 14 1.40776 0.97525 0.86437 0.67751 0.66480 0.89164 0.79113 0.67981 0.76742 2.90596 15 0.69256 1.62218 0.80658 0.79715 0.79810 0.71839 0.69541 0.57732 0.70894 0.65358 16 11.36012 0.06371 0.26338 0.65392 0.68486 0.32120 0.38955 0.22604 0.36769 0.51228 17 0.01035 44.48887 5.98891 0.96634 0.58260 4.49517 2.71078 11.02807 5.83949 12.00964 18 0.02015 2.74310 1.24904 0.96194 0.94211 0.98950 0.98467 1.00550 1.21099 4.04417 19 2.21435 0.15870 0.82774 0.97352 0.98669 0.86700 0.92108 1.09770 1.27916 0.39308 20 1.26341 0.17680 1.31485 1.74040 1.77724 1.18139 1.33250 1.21561 1.84740 1.14754 21 33.18468 0.10517 0.62347 0.98231 1.01154 0.71118 0.81086 0.47085 0.81392 0.51199 22 0.13872 31.44677 4.39937 1.20775 0.96446 3.24428 2.36013 6.62614 4.71885 0.51391 23 7.86611 0.29582 0.90595 0.94492 0.94941 0.89189 0.99305 0.63261 0.98345 0.39718 24 1.20909 4.64591 1.92301 1.04802 0.98290 1.52345 1.54198 1.76792 2.67366 0.45345 25 16.79093 0.11159 0.32115 0.56017 0.56840 0.36269 0.39854 0.25646 0.36986 0.27449 Base 100 0.68328 3.50523 49.34249 45.71419 0.00340 10.22906 0.00478 9.57817 0.68770