state (Emission order) Genome % CpG.hg19.bed.gz Exons.Gencodev10.hg19.bed.gz Genes.Gencodev10.hg19.bed.gz Introns.Gencodev10.hg19.bed.gz TES.Gencodev10.hg19.bed.gz TES_2kbp.Gencodev10.hg19.bed.gz TSS.Gencodev10.hg19.bed.gz TSS_2kbp.Gencodev10.hg19.bed.gz ZNF_genes.bed.gz 1 0.04617 20.55818 10.00263 1.92150 1.30472 10.65318 5.30323 8.47014 7.17381 1.55780 2 0.86377 53.92122 7.18140 1.60939 1.18374 3.10090 2.49430 40.96335 8.94680 3.75078 3 0.06582 87.59090 8.18176 1.40412 0.88555 3.57747 2.39098 28.56640 8.14665 0.97947 4 0.01731 71.95087 6.61513 1.40833 1.01054 3.73034 2.62401 14.90616 7.90667 0.92273 5 0.37794 9.78224 3.43320 1.51232 1.36782 2.46453 2.10763 6.30099 6.33233 2.10666 6 0.05382 5.95835 8.12018 1.94654 1.47588 10.02111 4.61241 6.27481 6.25909 1.34615 7 0.32785 1.26028 5.67048 1.93119 1.64791 6.00358 3.89518 2.68010 3.09820 0.91089 8 8.19063 0.27516 1.85930 1.84339 1.84620 1.73084 1.98033 0.90242 1.59171 2.42472 9 3.31316 0.78876 4.62985 1.94304 1.74041 4.79559 4.05195 1.82851 2.52489 2.30298 10 0.73295 4.23502 9.37259 1.97319 1.40750 10.54475 5.73256 3.69596 3.82506 2.33119 11 0.03142 2.49864 9.81871 1.91073 1.30806 7.55524 5.30405 1.76273 1.98170 75.82230 12 0.11663 1.15350 2.69702 1.84156 1.78022 2.66217 2.51989 0.88022 1.58051 52.25315 13 1.95115 0.61767 0.63424 0.73507 0.74460 0.62142 0.62952 0.38803 0.56420 3.78841 14 0.08943 1.29928 3.13650 0.77180 0.59227 1.91097 1.69472 0.87600 1.16228 18.59845 15 0.12009 1.34042 0.90942 0.92903 0.93280 0.81436 0.83183 0.56240 0.83122 1.79265 16 17.21489 0.15756 0.26461 0.64974 0.68048 0.33071 0.38397 0.24340 0.37533 0.77737 17 0.01534 9.06611 2.88639 0.50388 0.32214 2.59895 1.55691 3.91743 2.37940 6.52058 18 0.00710 1.90963 0.97099 1.04910 1.05752 0.93608 0.96013 0.95121 1.25779 1.98469 19 1.53868 0.40275 0.81786 1.10714 1.13192 0.84848 0.92239 1.11050 1.33837 0.53237 20 1.13135 0.36343 1.58973 1.77843 1.79714 1.35370 1.50045 1.35869 1.84638 1.13465 21 24.80780 0.21841 0.71550 1.10846 1.14042 0.79678 0.89997 0.53322 0.92162 0.79384 22 0.03507 25.15672 3.73607 1.15887 0.96328 2.22017 2.05828 5.64291 4.47512 0.77689 23 7.72690 0.62228 1.04789 0.91951 0.91092 1.07434 1.15687 0.83936 1.19788 0.35722 24 1.06591 11.25541 2.55470 1.08021 0.96913 2.00778 1.82155 3.15097 3.14281 0.41891 25 30.15881 0.14474 0.43224 0.71327 0.73015 0.47765 0.53890 0.34807 0.51340 0.33053 Base 100 0.68328 3.50523 49.34249 45.71419 0.00340 10.22906 0.00478 9.57817 0.68770